Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ06186.1COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin. (390 aa)    
Predicted Functional Partners:
EAQ06185.1
Hypothetical protein; COG1609 Transcriptional regulators.
 
     0.885
EAQ07715.1
Mannose-6-phosphate isomerase /; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.698
EAQ06187.1
Hypothetical protein.
       0.632
EAQ05758.1
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
  
  
 0.571
EAQ06190.1
Hypothetical protein; COG3718 Uncharacterized enzyme involved in inositol metabolism.
 
     0.491
EAQ06100.1
Aspartate kinase, monofunctional class; COG0527 Aspartokinases; Belongs to the aspartokinase family.
     
 0.485
EAQ07599.1
Peptidase, T4 family; COG3191 L-aminopeptidase/D-esterase.
  
  
  0.485
EAQ06194.1
Putative myo-inositol catabolism protein; COG1082 Sugar phosphate isomerases/epimerases.
 
   
 0.476
EAQ07925.1
Hypothetical protein; COG0662 Mannose-6-phosphate isomerase.
 
  
 0.470
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.445
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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