Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ06196.1COG1609 Transcriptional regulators. (332 aa)    
Predicted Functional Partners:
EAQ08212.1
Glutamine-pyruvate aminotransferase; COG0067 Glutamate synthase domain 1.
    
 
 0.877
EAQ06191.1
Hypothetical pfkB family carbohydrate kinase; COG0524 Sugar kinases, ribokinase family.
 
 
  0.783
EAQ06189.1
Fructose-1,6-bisphosphate aldolase, class II; COG0191 Fructose/tagatose bisphosphate aldolase.
  
 
 
 0.746
EAQ07789.1
Phosphocarrier protein HPr; COG1925 Phosphotransferase system, HPr-related proteins.
   
 
 0.746
EAQ06195.1
Hypothetical protein; COG0673 Predicted dehydrogenases and related proteins.
  
     0.745
EAQ06190.1
Hypothetical protein; COG3718 Uncharacterized enzyme involved in inositol metabolism.
  
     0.722
EAQ06193.1
Probable oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
  
     0.708
EAQ06194.1
Putative myo-inositol catabolism protein; COG1082 Sugar phosphate isomerases/epimerases.
 
    0.708
EAQ06197.1
COG1879 ABC-type sugar transport system, periplasmic component.
 
 
  0.662
EAQ06198.1
Permease protein of sugar ABC transporter; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 
  0.645
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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