Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
EAQ06198.1Permease protein of sugar ABC transporter; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components. (371 aa)    
Predicted Functional Partners:
EAQ06199.1
Sugar ABC transporter, ATP-binding protein; COG1129 ABC-type sugar transport system, ATPase component.
 
 0.984
EAQ06197.1
COG1879 ABC-type sugar transport system, periplasmic component.
 
  0.963
EAQ07229.1
Hypothetical protein; COG1129 ABC-type sugar transport system, ATPase component.
 
 0.911
EAQ07227.1
COG1879 ABC-type sugar transport system, periplasmic component.
 
  0.872
EAQ06200.1
COG3718 Uncharacterized enzyme involved in inositol metabolism.
 
    0.828
EAQ05822.1
COG1129 ABC-type sugar transport system, ATPase component.
 
 0.824
EAQ07188.1
COG1129 ABC-type sugar transport system, ATPase component.
 
 0.785
EAQ07184.1
Hypothetical protein; COG1609 Transcriptional regulators.
  
  0.656
EAQ07186.1
Putative rhizopine uptake ABC transporter periplasmic solute-binding protein precursor; COG1879 ABC-type sugar transport system, periplasmic component.
  
  0.656
EAQ07196.1
Hypothetical protein; COG1609 Transcriptional regulators.
  
  0.656
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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