Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
EAQ06202.1Hypothetical protein; COG0459 Chaperonin GroEL (HSP60 family). (143 aa)    
Predicted Functional Partners:
EAQ06201.1
Ribonucleoside-diphosphate reductase, putative; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
       0.679
EAQ06897.1
Hypothetical protein.
  
     0.626
EAQ06203.1
4-coumarate:CoA ligase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
       0.563
EAQ07130.1
Hypothetical protein.
  
     0.459
yacG
Hypothetical protein; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.
  
     0.458
EAQ07002.1
Hydrolase, NUDIX family; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
  
     0.455
EAQ07549.1
ATP-dependent DNA helicase, UvrD/Rep family; COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily.
  
     0.452
EAQ06464.1
COG2927 DNA polymerase III, chi subunit.
  
     0.449
EAQ05964.1
Hypothetical protein; Belongs to the UPF0262 family.
  
     0.433
EAQ06896.1
Hypothetical protein.
  
     0.432
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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