STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07829.1Transcriptional regulatory protein; COG0640 Predicted transcriptional regulators. (98 aa)    
Predicted Functional Partners:
EAQ07828.1
COG0587 DNA polymerase III, alpha subunit.
       0.548
EAQ07830.1
COG4630 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A.
       0.470
EAQ07831.1
COG4631 Xanthine dehydrogenase, molybdopterin-binding subunit B.
       0.470
EAQ07832.1
Xanthine dehydrogenase chaperone/MPT insertion protein; COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
       0.470
EAQ07833.1
Sugar ABC transporter, ATP-binding protein; COG3845 ABC-type uncharacterized transport systems, ATPase components.
       0.463
EAQ05982.1
COG4430 Uncharacterized protein conserved in bacteria.
 
     0.425
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.