STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07837.1Sodium:alanine symporter family protein; COG1115 Na+/alanine symporter. (521 aa)    
Predicted Functional Partners:
EAQ07838.1
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
 
    0.964
EAQ07445.1
COG4787 Flagellar basal body rod protein.
    
   0.529
EAQ05341.1
Putative transport integral membrane protein; COG0038 Chloride channel protein EriC.
  
    0.523
EAQ05872.1
COG0038 Chloride channel protein EriC.
   
    0.519
EAQ06024.1
COG2233 Xanthine/uracil permeases.
 
   
 0.501
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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