STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07844.1ABC transporter, permease protein; COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component. (838 aa)    
Predicted Functional Partners:
EAQ07843.1
ABC efflux transporter, ATPase subunit; COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component.
 
     0.950
EAQ07842.1
Lipolytic enzyme, G-D-S-L family; COG2755 Lysophospholipase L1 and related esterases.
 
     0.935
EAQ05405.1
Hypothetical protein; COG5621 Predicted secreted hydrolase.
  
    0.572
EAQ07617.1
Hydroxyneurosporene dehydrogenase.
  
    0.572
EAQ05403.1
ABC transporter, ATPase subunit; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
 
 0.548
lolD
ABC lipoprotein efflux transporter, ATPase subunit, LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 
 0.548
EAQ07075.1
COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
    
  0.492
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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