STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07861.1Capsular polysaccharide export ATP-binding protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component. (217 aa)    
Predicted Functional Partners:
EAQ07862.1
Capsular polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family; COG3524 Capsule polysaccharide export protein.
 
 
 0.999
EAQ07477.1
ABC transporter, permease protein; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
 0.999
EAQ07120.1
COG3563 Capsule polysaccharide export protein.
 
  
 0.976
EAQ07697.1
Putative capsule polysaccharide exporter; COG1596 Periplasmic protein involved in polysaccharide export.
 
  
 0.961
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase; COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Belongs to the KdsA family.
  
    0.858
EAQ07122.1
COG3562 Capsule polysaccharide export protein.
 
   
 0.841
EAQ06884.1
Hypothetical protein.
 
  
 0.822
EAQ07472.1
Hypothetical protein.
 
  
 0.799
EAQ07473.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.798
EAQ05914.1
Hypothetical protein.
 
    0.788
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.