Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ07867.1Probable multidrug-resistance related protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (363 aa)    
Predicted Functional Partners:
EAQ07865.1
Hypothetical protein; COG2319 FOG: WD40 repeat.
 
     0.738
EAQ07866.1
Hypothetical protein.
       0.689
EAQ07697.1
Putative capsule polysaccharide exporter; COG1596 Periplasmic protein involved in polysaccharide export.
  
 0.654
miaB
tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
  
   
 0.634
EAQ07868.1
COG2864 Cytochrome b subunit of formate dehydrogenase.
       0.561
EAQ07878.1
COG1145 Ferredoxin.
    
 0.558
EAQ07596.1
MiaB-like tRNA modifying enzyme; COG0621 2-methylthioadenine synthetase.
  
   
 0.514
EAQ07869.1
Formate dehydrogenase iron-sulfur subunit; COG0437 Fe-S-cluster-containing hydrogenase components 1.
  
    0.506
EAQ07148.1
Formate dehydrogenase, beta subunit; COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit.
    
 0.501
EAQ07877.1
Hypothetical protein; COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M).
 
     0.495
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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