STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07872.1Putative chaperone; COG3381 Uncharacterized component of anaerobic dehydrogenases. (173 aa)    
Predicted Functional Partners:
EAQ07870.1
Formate dehydrogenase, alpha subunit, putative; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
 0.927
EAQ07868.1
COG2864 Cytochrome b subunit of formate dehydrogenase.
 
  
 0.925
EAQ07878.1
COG1145 Ferredoxin.
 
  
 0.923
EAQ07869.1
Formate dehydrogenase iron-sulfur subunit; COG0437 Fe-S-cluster-containing hydrogenase components 1.
 
  
 0.919
EAQ07874.1
Hypothetical protein.
 
    0.916
EAQ07876.1
Hypothetical protein; COG1051 ADP-ribose pyrophosphatase.
 
     0.885
EAQ07877.1
Hypothetical protein; COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M).
 
     0.864
EAQ07875.1
Hypothetical protein.
 
     0.804
EAQ05538.1
Oxidoreductase, molybdopterin-binding; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.798
EAQ07873.1
Hypothetical protein.
 
     0.774
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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