Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ06369.1 | EAQ07775.1 | SKA53_04758 | SKA53_13098 | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | COG0681 Signal peptidase I; Belongs to the peptidase S26 family. | 0.423 |
| EAQ06369.1 | EAQ07879.1 | SKA53_04758 | SKA53_09154 | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | Hypothetical protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components. | 0.767 |
| EAQ06369.1 | EAQ07881.1 | SKA53_04758 | SKA53_09164 | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | COG4681 Uncharacterized protein conserved in bacteria. | 0.589 |
| EAQ06369.1 | EAQ08212.1 | SKA53_04758 | SKA53_10819 | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | Glutamine-pyruvate aminotransferase; COG0067 Glutamate synthase domain 1. | 0.563 |
| EAQ07397.1 | EAQ07881.1 | SKA53_11208 | SKA53_09164 | COG3170 Tfp pilus assembly protein FimV. | COG4681 Uncharacterized protein conserved in bacteria. | 0.503 |
| EAQ07411.1 | EAQ07775.1 | SKA53_11278 | SKA53_13098 | Sigma-54 factor (RpoN2); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | COG0681 Signal peptidase I; Belongs to the peptidase S26 family. | 0.575 |
| EAQ07411.1 | EAQ07881.1 | SKA53_11278 | SKA53_09164 | Sigma-54 factor (RpoN2); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | COG4681 Uncharacterized protein conserved in bacteria. | 0.497 |
| EAQ07411.1 | EAQ07993.1 | SKA53_11278 | SKA53_09724 | Sigma-54 factor (RpoN2); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Phosphate transport system regulatory protein; Plays a role in the regulation of phosphate uptake. | 0.463 |
| EAQ07411.1 | EAQ08212.1 | SKA53_11278 | SKA53_10819 | Sigma-54 factor (RpoN2); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Glutamine-pyruvate aminotransferase; COG0067 Glutamate synthase domain 1. | 0.679 |
| EAQ07775.1 | EAQ06369.1 | SKA53_13098 | SKA53_04758 | COG0681 Signal peptidase I; Belongs to the peptidase S26 family. | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | 0.423 |
| EAQ07775.1 | EAQ07411.1 | SKA53_13098 | SKA53_11278 | COG0681 Signal peptidase I; Belongs to the peptidase S26 family. | Sigma-54 factor (RpoN2); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.575 |
| EAQ07775.1 | EAQ07881.1 | SKA53_13098 | SKA53_09164 | COG0681 Signal peptidase I; Belongs to the peptidase S26 family. | COG4681 Uncharacterized protein conserved in bacteria. | 0.514 |
| EAQ07775.1 | EAQ07993.1 | SKA53_13098 | SKA53_09724 | COG0681 Signal peptidase I; Belongs to the peptidase S26 family. | Phosphate transport system regulatory protein; Plays a role in the regulation of phosphate uptake. | 0.423 |
| EAQ07775.1 | EAQ08212.1 | SKA53_13098 | SKA53_10819 | COG0681 Signal peptidase I; Belongs to the peptidase S26 family. | Glutamine-pyruvate aminotransferase; COG0067 Glutamate synthase domain 1. | 0.705 |
| EAQ07879.1 | EAQ06369.1 | SKA53_09154 | SKA53_04758 | Hypothetical protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components. | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | 0.767 |
| EAQ07879.1 | EAQ07881.1 | SKA53_09154 | SKA53_09164 | Hypothetical protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components. | COG4681 Uncharacterized protein conserved in bacteria. | 0.476 |
| EAQ07879.1 | EAQ07993.1 | SKA53_09154 | SKA53_09724 | Hypothetical protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components. | Phosphate transport system regulatory protein; Plays a role in the regulation of phosphate uptake. | 0.767 |
| EAQ07879.1 | EAQ08212.1 | SKA53_09154 | SKA53_10819 | Hypothetical protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components. | Glutamine-pyruvate aminotransferase; COG0067 Glutamate synthase domain 1. | 0.489 |
| EAQ07881.1 | EAQ06369.1 | SKA53_09164 | SKA53_04758 | COG4681 Uncharacterized protein conserved in bacteria. | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | 0.589 |
| EAQ07881.1 | EAQ07397.1 | SKA53_09164 | SKA53_11208 | COG4681 Uncharacterized protein conserved in bacteria. | COG3170 Tfp pilus assembly protein FimV. | 0.503 |
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