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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07885.1Succinylglutamate desuccinylase/aspartoacylase family protein; COG3608 Predicted deacylase. (338 aa)    
Predicted Functional Partners:
EAQ07886.1
Hypothetical protein; COG0006 Xaa-Pro aminopeptidase.
 
  
  0.960
EAQ07887.1
Hypothetical protein; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.901
EAQ06935.1
Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.721
EAQ05542.1
COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.680
EAQ07223.1
Metallopeptidase, family M24; COG0006 Xaa-Pro aminopeptidase.
    
  0.452
EAQ05870.1
COG0006 Xaa-Pro aminopeptidase.
    
  0.452
EAQ08041.1
Creatinase; COG0006 Xaa-Pro aminopeptidase.
    
  0.452
EAQ08246.1
Creatinase; COG0006 Xaa-Pro aminopeptidase.
    
  0.452
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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