STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
EAQ07890.1Copper-translocating P-type ATPase; COG2217 Cation transport ATPase. (753 aa)    
Predicted Functional Partners:
EAQ05313.1
Heavy metal transport/detoxification protein; COG2608 Copper chaperone.
 
 
 0.876
EAQ08007.1
COG2608 Copper chaperone.
 
 
 0.875
EAQ07889.1
COG0789 Predicted transcriptional regulators.
 
  
 0.849
EAQ06163.1
Hypothetical protein.
  
  
 0.591
EAQ07891.1
27kDa outer membrane protein; COG1651 Protein-disulfide isomerase.
 
 
   0.556
EAQ06161.1
fixH protein, putative.
     
 0.503
EAQ07119.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.493
EAQ07888.1
Predicted Orn/Lys/Arg decarboxylase; COG1982 Arginine/lysine/ornithine decarboxylases.
       0.475
EAQ07892.1
COG1376 Uncharacterized protein conserved in bacteria.
 
     0.440
EAQ05791.1
Transcriptional regulator/arsenate reductase; COG0640 Predicted transcriptional regulators; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.409
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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