STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07892.1COG1376 Uncharacterized protein conserved in bacteria. (191 aa)    
Predicted Functional Partners:
EAQ07891.1
27kDa outer membrane protein; COG1651 Protein-disulfide isomerase.
 
     0.734
EAQ07506.1
Lipoprotein, putative; COG2340 Uncharacterized protein with SCP/PR1 domains.
 
     0.644
EAQ07507.1
ErfK/YbiS/YcfS/YnhG family protein; COG3034 Uncharacterized protein conserved in bacteria.
 
  
 0.641
mepA
COG3770 Murein endopeptidase.
  
     0.569
EAQ06208.1
Hypothetical protein.
  
     0.533
EAQ07893.1
Hypothetical protein; COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
  
    0.475
EAQ07894.1
Chemotaxis regulator protein; COG0784 FOG: CheY-like receiver.
       0.475
EAQ07895.1
COG0643 Chemotaxis protein histidine kinase and related kinases.
       0.475
EAQ07030.1
Hypothetical protein.
  
     0.462
EAQ06211.1
Hypothetical protein.
  
     0.450
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.