Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ07893.1Hypothetical protein; COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor). (94 aa)    
Predicted Functional Partners:
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
  
 
 0.979
EAQ05794.1
ABC transporter, ATPase subunit; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
   
 0.879
EAQ05795.1
ABC transporter, inner membrane subunit; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
   
 0.868
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
    0.836
EAQ07449.1
Flagellar proximal rod protein FlgB; COG1815 Flagellar basal body protein.
   
    0.836
EAQ07894.1
Chemotaxis regulator protein; COG0784 FOG: CheY-like receiver.
  
 
  0.797
EAQ07429.1
Flagellar FliF M-ring protein; COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein.
  
    0.795
EAQ07895.1
COG0643 Chemotaxis protein histidine kinase and related kinases.
       0.792
EAQ08166.1
Flagellar protein FlgJ, putative.
   
    0.787
EAQ07438.1
COG4786 Flagellar basal body rod protein.
   
    0.787
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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