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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07893.1Hypothetical protein; COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor). (94 aa)    
Predicted Functional Partners:
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
  
 
 0.984
EAQ05794.1
ABC transporter, ATPase subunit; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
   
  0.963
EAQ05795.1
ABC transporter, inner membrane subunit; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
   
  0.962
EAQ06442.1
Hypothetical protein; COG2252 Permeases.
  
  0.909
EAQ05793.1
Putative ABC transporter, periplasmic substrate-binding protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
  
  0.909
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
    0.861
EAQ07449.1
Flagellar proximal rod protein FlgB; COG1815 Flagellar basal body protein.
   
    0.861
EAQ07899.1
Chemotaxis response regulator; COG0784 FOG: CheY-like receiver.
    
 0.853
EAQ07895.1
COG0643 Chemotaxis protein histidine kinase and related kinases.
    
  0.818
EAQ07894.1
Chemotaxis regulator protein; COG0784 FOG: CheY-like receiver.
  
 
  0.814
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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