STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07933.1Hypothetical protein. (122 aa)    
Predicted Functional Partners:
EAQ07934.1
Esterase/lipase/thioesterase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.711
EAQ08037.1
Hypothetical protein.
  
     0.606
EAQ08124.1
Conserved hypoothetical protein; COG1585 Membrane protein implicated in regulation of membrane protease activity.
  
     0.508
EAQ05797.1
Hypothetical protein; COG2319 FOG: WD40 repeat.
  
     0.476
EAQ07935.1
GTP-binding protein LepA; COG5510 Predicted small secreted protein.
       0.433
EAQ06156.1
Hypothetical protein.
  
     0.417
EAQ07827.1
SlyX protein, putative; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
     0.408
EAQ08056.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
     0.407
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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