STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07963.1Hypothetical protein; COG1335 Amidases related to nicotinamidase. (84 aa)    
Predicted Functional Partners:
EAQ05850.1
Hypothetical protein.
  
     0.726
EAQ07964.1
methylmalonyl-CoA epimerase; COG0346 Lactoylglutathione lyase and related lyases.
       0.721
EAQ05832.1
COG5488 Integral membrane protein.
  
     0.712
EAQ05891.1
Hypothetical protein; COG5462 Predicted secreted (periplasmic) protein.
  
     0.669
EAQ06518.1
Hypothetical protein.
  
     0.666
EAQ06660.1
Hypothetical protein; COG2217 Cation transport ATPase.
  
     0.650
EAQ05306.1
COG3313 Predicted Fe-S protein.
  
     0.636
EAQ06114.1
Hypothetical protein.
  
     0.619
EAQ07098.1
Transcriptional regulator, XRE family; COG1396 Predicted transcriptional regulators.
  
     0.560
EAQ05304.1
Cytochrome c-type biogenesis protein CycH; COG4235 Cytochrome c biogenesis factor.
  
     0.560
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.