STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07980.1COG3238 Uncharacterized protein conserved in bacteria. (155 aa)    
Predicted Functional Partners:
EAQ07981.1
COG3238 Uncharacterized protein conserved in bacteria.
 
  
  0.993
EAQ07077.1
COG3238 Uncharacterized protein conserved in bacteria.
    
  0.828
EAQ06601.1
Hypothetical protein; COG0699 Predicted GTPases (dynamin-related).
  
     0.621
EAQ05579.1
Transcriptional regulator, AraC family; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.614
EAQ06284.1
Putative integrase/resolvase recombinase protein; COG4974 Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.575
EAQ05618.1
Hypothetical protein.
  
     0.521
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
    0.504
EAQ08123.1
COG0284 Orotidine-5'-phosphate decarboxylase.
  
    0.503
EAQ07608.1
Hypothetical protein.
  
     0.466
EAQ08088.1
Hypothetical protein; COG0306 Phosphate/sulphate permeases.
  
     0.462
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.