Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ07984.1COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit. (560 aa)    
Predicted Functional Partners:
EAQ07985.1
Hydantoin utilization protein; COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit.
 0.999
EAQ06246.1
COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit.
 0.996
EAQ07611.1
Hypothetical protein; COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit.
 
 0.912
EAQ07983.1
Hypothetical protein; COG0665 Glycine/D-amino acid oxidases (deaminating).
 
     0.896
EAQ07982.1
Hypothetical protein; COG0451 Nucleoside-diphosphate-sugar epimerases.
 
     0.829
EAQ08212.1
Glutamine-pyruvate aminotransferase; COG0067 Glutamate synthase domain 1.
     
  0.819
EAQ06935.1
Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.795
tadA
Hypothetical protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
     
  0.693
EAQ07986.1
Transcriptional regulators, LysR family; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.638
EAQ06755.1
COG2049 Allophanate hydrolase subunit 1.
    
  0.412
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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