STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ08003.1COG0589 Universal stress protein UspA and related nucleotide-binding proteins. (283 aa)    
Predicted Functional Partners:
EAQ08001.1
Hypothetical protein; COG0395 ABC-type sugar transport system, permease component.
 
     0.828
EAQ08002.1
COG3181 Uncharacterized protein conserved in bacteria.
 
     0.728
EAQ05959.1
Hypothetical protein.
  
    0.609
EAQ07955.1
Hypothetical protein.
  
     0.508
EAQ06284.1
Putative integrase/resolvase recombinase protein; COG4974 Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.470
EAQ05598.1
Bacterial regulatory protein, MarR; COG1846 Transcriptional regulators.
  
     0.461
EAQ06879.1
ADA regulatory protein; COG2207 AraC-type DNA-binding domain-containing proteins.
   
    0.458
EAQ07128.1
Hypothetical protein.
  
     0.439
EAQ05599.1
Hypothetical protein; Belongs to the UPF0311 family.
  
     0.432
EAQ06601.1
Hypothetical protein; COG0699 Predicted GTPases (dynamin-related).
  
     0.404
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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