Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ08007.1COG2608 Copper chaperone. (65 aa)    
Predicted Functional Partners:
EAQ05314.1
COG2217 Cation transport ATPase.
 
 
 0.916
EAQ08005.1
COG3544 Uncharacterized protein conserved in bacteria.
 
    0.896
EAQ07890.1
Copper-translocating P-type ATPase; COG2217 Cation transport ATPase.
 
 
 0.875
EAQ06162.1
Copper-translocating P-type ATPase; COG2217 Cation transport ATPase.
  
 
 0.830
EAQ08006.1
Hypothetical protein.
       0.773
EAQ05313.1
Heavy metal transport/detoxification protein; COG2608 Copper chaperone.
  
     0.741
EAQ07889.1
COG0789 Predicted transcriptional regulators.
 
  
 0.535
EAQ05791.1
Transcriptional regulator/arsenate reductase; COG0640 Predicted transcriptional regulators; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.475
EAQ06744.1
COG1448 Aspartate/tyrosine/aromatic aminotransferase.
    
   0.442
EAQ05225.1
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
   0.439
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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