Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ08022.1COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component. (426 aa)    
Predicted Functional Partners:
EAQ08020.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.999
EAQ08021.1
COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.999
EAQ08019.1
Branched-chain amino acid ABC transporter, ATP-binding protein, putative; COG4674 Uncharacterized ABC-type transport system, ATPase component.
 
 
 0.992
EAQ08018.1
COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 
 0.961
EAQ05577.1
Putative branched-chain amino acid transporter substrate-binding protein; COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
     
  0.815
EAQ06379.1
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
     
  0.815
EAQ06013.1
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
     
  0.815
EAQ08133.1
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
     
  0.815
EAQ06011.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.748
ureF
Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
   
 0.728
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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