STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ08036.1Hypothetical protein; COG0751 Glycyl-tRNA synthetase, beta subunit. (216 aa)    
Predicted Functional Partners:
EAQ08037.1
Hypothetical protein.
 
    0.951
EAQ08038.1
Hypothetical protein; COG2216 High-affinity K+ transport system, ATPase chain B.
       0.653
EAQ06634.1
Hypothetical protein.
  
     0.553
EAQ07639.1
Fatty acid desaturase family protein.
  
   
 0.518
EAQ06958.1
Hypothetical protein.
  
     0.513
EAQ07007.1
Hypothetical protein.
  
     0.484
EAQ05437.1
Hypothetical protein.
  
     0.467
EAQ05914.1
Hypothetical protein.
  
     0.431
EAQ07754.1
Putative ATP-dependent protease La, LON; COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease.
      
 0.424
clpS
ATP-dependent Clp protease, adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
      
 0.420
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.