STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ08036.1Hypothetical protein; COG0751 Glycyl-tRNA synthetase, beta subunit. (216 aa)    
Predicted Functional Partners:
EAQ08037.1
Hypothetical protein.
 
    0.951
EAQ08038.1
Hypothetical protein; COG2216 High-affinity K+ transport system, ATPase chain B.
       0.689
EAQ06634.1
Hypothetical protein.
  
     0.553
EAQ06958.1
Hypothetical protein.
  
     0.513
EAQ07639.1
Fatty acid desaturase family protein.
  
   
 0.501
EAQ07007.1
Hypothetical protein.
  
     0.484
EAQ05437.1
Hypothetical protein.
  
     0.467
EAQ05914.1
Hypothetical protein.
  
     0.431
EAQ07290.1
AhpC/TSA family protein; COG1225 Peroxiredoxin.
      
 0.414
EAQ07754.1
Putative ATP-dependent protease La, LON; COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease.
      
 0.414
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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