Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ08056.1COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (129 aa)    
Predicted Functional Partners:
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
   
 0.899
EAQ08009.1
COG0642 Signal transduction histidine kinase.
   
 0.762
EAQ05201.1
Sensory box sensor histidine kianse/response regulator; COG0642 Signal transduction histidine kinase.
 
 
 0.743
cobD
Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
       0.678
EAQ08058.1
Cobalamin biosynthetic protein CobC; COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase.
       0.667
EAQ06345.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
    
 0.635
EAQ06346.1
Methyl-accepting chemotaxis protein McpD; COG2202 FOG: PAS/PAC domain.
    
 0.635
EAQ07791.1
Hypothetical protein.
  
    0.628
EAQ07165.1
Sensor histidine kinase; COG0591 Na+/proline symporter.
   
 0.591
EAQ08057.1
COG5469 Predicted metal-binding protein.
       0.585
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.