STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ08088.1Hypothetical protein; COG0306 Phosphate/sulphate permeases. (127 aa)    
Predicted Functional Partners:
EAQ08089.1
NADPH-dependent FMN reductase domain protein; COG0431 Predicted flavoprotein.
       0.565
EAQ05618.1
Hypothetical protein.
  
     0.538
EAQ06601.1
Hypothetical protein; COG0699 Predicted GTPases (dynamin-related).
  
     0.534
EAQ07980.1
COG3238 Uncharacterized protein conserved in bacteria.
  
     0.462
EAQ06604.1
COG0515 Serine/threonine protein kinase.
  
     0.442
EAQ06284.1
Putative integrase/resolvase recombinase protein; COG4974 Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.424
EAQ06710.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.414
EAQ08090.1
Acetolactate synthase II large subunit; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; Belongs to the TPP enzyme family.
       0.410
EAQ05462.1
Probable protease precursor.
  
     0.405
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.