Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ06674.1 | EAQ08100.1 | SKA53_14041 | SKA53_10259 | Hypothetical protein; COG4942 Membrane-bound metallopeptidase. | COG3786 Uncharacterized protein conserved in bacteria. | 0.451 |
| EAQ06674.1 | rppH | SKA53_14041 | SKA53_10254 | Hypothetical protein; COG4942 Membrane-bound metallopeptidase. | Hydrolase, NUDIX family, NudH subfamily; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. | 0.453 |
| EAQ06896.1 | EAQ06898.1 | SKA53_15151 | SKA53_15161 | Hypothetical protein. | Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain). | 0.924 |
| EAQ06896.1 | EAQ08100.1 | SKA53_15151 | SKA53_10259 | Hypothetical protein. | COG3786 Uncharacterized protein conserved in bacteria. | 0.422 |
| EAQ06898.1 | EAQ06896.1 | SKA53_15161 | SKA53_15151 | Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain). | Hypothetical protein. | 0.924 |
| EAQ06898.1 | EAQ08100.1 | SKA53_15161 | SKA53_10259 | Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain). | COG3786 Uncharacterized protein conserved in bacteria. | 0.414 |
| EAQ08100.1 | EAQ06674.1 | SKA53_10259 | SKA53_14041 | COG3786 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG4942 Membrane-bound metallopeptidase. | 0.451 |
| EAQ08100.1 | EAQ06896.1 | SKA53_10259 | SKA53_15151 | COG3786 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.422 |
| EAQ08100.1 | EAQ06898.1 | SKA53_10259 | SKA53_15161 | COG3786 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain). | 0.414 |
| EAQ08100.1 | EAQ08102.1 | SKA53_10259 | SKA53_10269 | COG3786 Uncharacterized protein conserved in bacteria. | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.494 |
| EAQ08100.1 | ribA | SKA53_10259 | SKA53_10264 | COG3786 Uncharacterized protein conserved in bacteria. | 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. | 0.701 |
| EAQ08100.1 | rppH | SKA53_10259 | SKA53_10254 | COG3786 Uncharacterized protein conserved in bacteria. | Hydrolase, NUDIX family, NudH subfamily; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. | 0.629 |
| EAQ08102.1 | EAQ08100.1 | SKA53_10269 | SKA53_10259 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | COG3786 Uncharacterized protein conserved in bacteria. | 0.494 |
| EAQ08102.1 | ribA | SKA53_10269 | SKA53_10264 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. | 0.592 |
| ribA | EAQ08100.1 | SKA53_10264 | SKA53_10259 | 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. | COG3786 Uncharacterized protein conserved in bacteria. | 0.701 |
| ribA | EAQ08102.1 | SKA53_10264 | SKA53_10269 | 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.592 |
| ribA | rppH | SKA53_10264 | SKA53_10254 | 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. | Hydrolase, NUDIX family, NudH subfamily; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. | 0.584 |
| rppH | EAQ06674.1 | SKA53_10254 | SKA53_14041 | Hydrolase, NUDIX family, NudH subfamily; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. | Hypothetical protein; COG4942 Membrane-bound metallopeptidase. | 0.453 |
| rppH | EAQ08100.1 | SKA53_10254 | SKA53_10259 | Hydrolase, NUDIX family, NudH subfamily; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. | COG3786 Uncharacterized protein conserved in bacteria. | 0.629 |
| rppH | ribA | SKA53_10254 | SKA53_10264 | Hydrolase, NUDIX family, NudH subfamily; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. | 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. | 0.584 |