Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ08108.1COG1454 Alcohol dehydrogenase, class IV. (381 aa)    
Predicted Functional Partners:
EAQ08109.1
COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
 
  0.954
EAQ08110.1
COG0174 Glutamine synthetase.
 
  
  0.899
EAQ08212.1
Glutamine-pyruvate aminotransferase; COG0067 Glutamate synthase domain 1.
   
 
 0.877
EAQ07315.1
COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
  
 
 0.865
EAQ08111.1
Bacterial extracellular solute-binding protein, family 7; COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component.
 
    0.851
EAQ05631.1
Oxidoreductase, zinc-binding dehydrogenase family; COG1062 Zn-dependent alcohol dehydrogenases, class III.
    
 0.797
EAQ08113.1
TRAP-T family transporter, DctQ (4TMs) subunit; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
     0.797
EAQ06695.1
Glutathione-dependent formaldehyde dehydrogenase; COG1062 Zn-dependent alcohol dehydrogenases, class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.797
EAQ07148.1
Formate dehydrogenase, beta subunit; COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit.
  
 
 0.780
EAQ08112.1
Putative TRAP-T family transporter, DctM (12TMs) subunit; COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
 
     0.752
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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