Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ08125.1Band 7 protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs. (296 aa)    
Predicted Functional Partners:
EAQ08124.1
Conserved hypoothetical protein; COG1585 Membrane protein implicated in regulation of membrane protease activity.
 
   0.977
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.869
EAQ08126.1
D-amino acid dehydrogenase small subunit; COG0665 Glycine/D-amino acid oxidases (deaminating).
  
    0.686
EAQ06116.1
Cytochrome c oxidase polypeptide II precursor (Cytochrome AA3 subunit 2); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
   0.675
EAQ06719.1
Acetyltransferase, GNAT family; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
 
    0.559
EAQ07689.1
Putative zinc protease; COG0612 Predicted Zn-dependent peptidases.
  
  0.537
EAQ06731.1
Hypothetical protein; COG1678 putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
  
    0.535
EAQ06616.1
COG2200 FOG: EAL domain.
   
    0.528
EAQ06109.1
Peptidase, M16 family; COG0612 Predicted Zn-dependent peptidases; Belongs to the peptidase M16 family.
   
  0.512
EAQ07690.1
Putative zinc protease; COG0612 Predicted Zn-dependent peptidases; Belongs to the peptidase M16 family.
   
  0.512
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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