EAQ08129.1 protein (Yoonia vestfoldensis SKA53)

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Score

EAQ08129.1

Hypothetical protein. (22 aa)

Predicted Functional Partners:

rpoC

0.993

rpsD

0.992

rpsS

0.992

rpmC

0.992

rpsQ

0.992

rplX

0.992

rpsN

0.992

rpsH

0.992

rplR

0.992

rpmD

0.992

Your Current Organism:

Yoonia vestfoldensis SKA53

NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAQ08129.1	rplR	SKA53_10404	SKA53_13421	Hypothetical protein.	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.992
EAQ08129.1	rplX	SKA53_10404	SKA53_13396	Hypothetical protein.	Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.992
EAQ08129.1	rpmC	SKA53_10404	SKA53_13381	Hypothetical protein.	COG0255 Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.992
EAQ08129.1	rpmD	SKA53_10404	SKA53_13431	Hypothetical protein.	COG1841 Ribosomal protein L30/L7E.	0.992
EAQ08129.1	rpoC	SKA53_10404	SKA53_13278	Hypothetical protein.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.993
EAQ08129.1	rpsD	SKA53_10404	SKA53_09654	Hypothetical protein.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.992
EAQ08129.1	rpsH	SKA53_10404	SKA53_13411	Hypothetical protein.	Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.992
EAQ08129.1	rpsN	SKA53_10404	SKA53_13406	Hypothetical protein.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.992
EAQ08129.1	rpsQ	SKA53_10404	SKA53_13386	Hypothetical protein.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.992
EAQ08129.1	rpsS	SKA53_10404	SKA53_13351	Hypothetical protein.	Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.992
rplR	EAQ08129.1	SKA53_13421	SKA53_10404	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	Hypothetical protein.	0.992
rplR	rplX	SKA53_13421	SKA53_13396	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.999
rplR	rpmC	SKA53_13421	SKA53_13381	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	COG0255 Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.998
rplR	rpmD	SKA53_13421	SKA53_13431	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	COG1841 Ribosomal protein L30/L7E.	0.998
rplR	rpoC	SKA53_13421	SKA53_13278	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
rplR	rpsD	SKA53_13421	SKA53_09654	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.993
rplR	rpsH	SKA53_13421	SKA53_13411	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.999
rplR	rpsN	SKA53_13421	SKA53_13406	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.998
rplR	rpsQ	SKA53_13421	SKA53_13386	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.998
rplR	rpsS	SKA53_13421	SKA53_13351	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.995