STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ08148.1COG0463 Glycosyltransferases involved in cell wall biogenesis. (310 aa)    
Predicted Functional Partners:
EAQ08149.1
Pyrazinamidase/nicotinamidase; COG1335 Amidases related to nicotinamidase.
       0.773
EAQ06420.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.753
EAQ05628.1
Glycosyltransferase, family 2; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.641
EAQ06433.1
Undecaprenyl-phosphate galactosephosphotransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.624
EAQ05616.1
Putative glycosyltransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.618
EAQ08150.1
Heat shock protein, Hsp70 family; COG0443 Molecular chaperone.
  
   0.614
EAQ05620.1
Protein-tyrosine kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.603
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
       0.603
EAQ06438.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.575
EAQ07714.1
COG1087 UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
   
 0.549
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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