STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ08151.1Rhodanese-like domain protein; COG1054 Predicted sulfurtransferase; Belongs to the UPF0176 family. (301 aa)    
Predicted Functional Partners:
EAQ08152.1
Hypothetical protein; COG3180 putative ammonia monooxygenase.
       0.809
EAQ08153.1
COG1770 Protease II.
       0.773
EAQ08150.1
Heat shock protein, Hsp70 family; COG0443 Molecular chaperone.
       0.729
EAQ08149.1
Pyrazinamidase/nicotinamidase; COG1335 Amidases related to nicotinamidase.
       0.678
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
       0.597
EAQ08148.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
       0.497
EAQ07595.1
Glutathione S-transferase-like protein; COG0625 Glutathione S-transferase.
 
     0.411
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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