STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ08167.1Hypothetical protein. (113 aa)    
Predicted Functional Partners:
EAQ08166.1
Flagellar protein FlgJ, putative.
 
     0.934
EAQ08165.1
COG3144 Flagellar hook-length control protein.
 
     0.826
EAQ06601.1
Hypothetical protein; COG0699 Predicted GTPases (dynamin-related).
  
     0.696
EAQ06599.1
Hypothetical protein; COG0699 Predicted GTPases (dynamin-related).
  
     0.676
EAQ06600.1
Hypothetical protein; COG0699 Predicted GTPases (dynamin-related).
  
     0.665
EAQ06526.1
LysM domain protein; COG1652 Uncharacterized protein containing LysM domain.
  
     0.612
EAQ07351.1
Hypothetical protein.
  
     0.538
EAQ06603.1
Hypothetical protein; COG1716 FOG: FHA domain.
  
     0.516
EAQ08164.1
Possible FlgD protein; COG1843 Flagellar hook capping protein.
 
     0.505
EAQ06602.1
COG0631 Serine/threonine protein phosphatase.
  
     0.457
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.