Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ05437.1 | EAQ06838.1 | SKA53_03474 | SKA53_14861 | Hypothetical protein. | Hypothetical protein. | 0.733 |
EAQ05437.1 | EAQ07122.1 | SKA53_03474 | SKA53_01961 | Hypothetical protein. | COG3562 Capsule polysaccharide export protein. | 0.782 |
EAQ05437.1 | EAQ07177.1 | SKA53_03474 | SKA53_02236 | Hypothetical protein. | Hypothetical protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.769 |
EAQ05437.1 | EAQ07470.1 | SKA53_03474 | SKA53_11573 | Hypothetical protein. | Hypothetical protein. | 0.770 |
EAQ05437.1 | EAQ07471.1 | SKA53_03474 | SKA53_11578 | Hypothetical protein. | core-2/I-branching enzyme family protein. | 0.771 |
EAQ05437.1 | EAQ07472.1 | SKA53_03474 | SKA53_11583 | Hypothetical protein. | Hypothetical protein. | 0.790 |
EAQ05437.1 | EAQ07473.1 | SKA53_03474 | SKA53_11588 | Hypothetical protein. | Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis. | 0.790 |
EAQ05437.1 | EAQ08176.1 | SKA53_03474 | SKA53_10639 | Hypothetical protein. | Type I secretion target repeat protein. | 0.720 |
EAQ05716.1 | EAQ08176.1 | SKA53_06417 | SKA53_10639 | Putative Hemin receptor protein HmuR; COG1629 Outer membrane receptor proteins, mostly Fe transport. | Type I secretion target repeat protein. | 0.857 |
EAQ06838.1 | EAQ05437.1 | SKA53_14861 | SKA53_03474 | Hypothetical protein. | Hypothetical protein. | 0.733 |
EAQ06838.1 | EAQ07122.1 | SKA53_14861 | SKA53_01961 | Hypothetical protein. | COG3562 Capsule polysaccharide export protein. | 0.720 |
EAQ06838.1 | EAQ07177.1 | SKA53_14861 | SKA53_02236 | Hypothetical protein. | Hypothetical protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.737 |
EAQ06838.1 | EAQ07470.1 | SKA53_14861 | SKA53_11573 | Hypothetical protein. | Hypothetical protein. | 0.752 |
EAQ06838.1 | EAQ07471.1 | SKA53_14861 | SKA53_11578 | Hypothetical protein. | core-2/I-branching enzyme family protein. | 0.751 |
EAQ06838.1 | EAQ07472.1 | SKA53_14861 | SKA53_11583 | Hypothetical protein. | Hypothetical protein. | 0.746 |
EAQ06838.1 | EAQ07473.1 | SKA53_14861 | SKA53_11588 | Hypothetical protein. | Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis. | 0.731 |
EAQ06838.1 | EAQ08176.1 | SKA53_14861 | SKA53_10639 | Hypothetical protein. | Type I secretion target repeat protein. | 0.824 |
EAQ07122.1 | EAQ05437.1 | SKA53_01961 | SKA53_03474 | COG3562 Capsule polysaccharide export protein. | Hypothetical protein. | 0.782 |
EAQ07122.1 | EAQ06838.1 | SKA53_01961 | SKA53_14861 | COG3562 Capsule polysaccharide export protein. | Hypothetical protein. | 0.720 |
EAQ07122.1 | EAQ07177.1 | SKA53_01961 | SKA53_02236 | COG3562 Capsule polysaccharide export protein. | Hypothetical protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.754 |
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