STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ08187.1D-galactose 1-dehydrogenase, hypothetical; COG0673 Predicted dehydrogenases and related proteins. (302 aa)    
Predicted Functional Partners:
EAQ05409.1
Putative aldose 1-epimerase protein; COG2017 Galactose mutarotase and related enzymes.
 
 
 0.907
EAQ08188.1
Putative dihydroxy-acid dehydratase protein; COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
 
     0.884
EAQ05410.1
Putative beta-galactosidase protein; COG1874 Beta-galactosidase.
  
 
  0.854
EAQ05411.1
Smp-30/Cgr1 family protein; COG3386 Gluconolactonase.
 
 
  0.763
EAQ05729.1
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
   
 
  0.628
EAQ08216.1
NADH ubiquinone oxidoreductase, putative; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
   
 
  0.628
EAQ05758.1
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
  
 
 0.621
EAQ05413.1
Putative 2-dehydro-3-deoxygalactonokinase; COG3734 2-keto-3-deoxy-galactonokinase.
 
     0.608
EAQ05750.1
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
  
 
  0.578
EAQ07194.1
MocC-like protein; COG1082 Sugar phosphate isomerases/epimerases; similar to tomyo-inositol catabolism iolE.
  
 
  0.571
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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