STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ08187.1D-galactose 1-dehydrogenase, hypothetical; COG0673 Predicted dehydrogenases and related proteins. (302 aa)    
Predicted Functional Partners:
EAQ05409.1
Putative aldose 1-epimerase protein; COG2017 Galactose mutarotase and related enzymes.
 
 
  0.889
EAQ08188.1
Putative dihydroxy-acid dehydratase protein; COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
 
   
 0.889
EAQ05410.1
Putative beta-galactosidase protein; COG1874 Beta-galactosidase.
  
 
  0.819
EAQ05415.1
COG3345 Alpha-galactosidase.
     
  0.815
EAQ05411.1
Smp-30/Cgr1 family protein; COG3386 Gluconolactonase.
 
 
  0.767
EAQ05414.1
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
  
  0.755
EAQ07714.1
COG1087 UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
  0.695
EAQ05413.1
Putative 2-dehydro-3-deoxygalactonokinase; COG3734 2-keto-3-deoxy-galactonokinase.
 
   
 0.681
EAQ05412.1
COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
 
  
 0.562
EAQ05467.1
COG2124 Cytochrome P450.
     
  0.502
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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