STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ08235.1Sarcosine oxidase, alpha subunit; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family. (1000 aa)    
Predicted Functional Partners:
EAQ08236.1
Hypothetical protein; COG4311 Sarcosine oxidase delta subunit.
 0.999
EAQ08234.1
COG4583 Sarcosine oxidase gamma subunit.
 
 0.998
EAQ07113.1
COG4311 Sarcosine oxidase delta subunit.
 
 0.997
EAQ08237.1
Hypothetical protein; COG0665 Glycine/D-amino acid oxidases (deaminating).
 
 0.997
EAQ05302.1
COG4311 Sarcosine oxidase delta subunit.
 
 0.996
EAQ07112.1
Sarcosine oxidase, beta subunit family; COG0665 Glycine/D-amino acid oxidases (deaminating).
 
 0.991
EAQ05303.1
Sarcosine oxidase, beta subunit family; COG0665 Glycine/D-amino acid oxidases (deaminating).
 
 0.991
EAQ07115.1
COG4583 Sarcosine oxidase gamma subunit.
 
 0.990
EAQ05300.1
COG4583 Sarcosine oxidase gamma subunit.
 
 0.990
EAQ06343.1
Aminomethyl transferase family protein; COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family.
 
0.988
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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