Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ08239.1Transporter, BCCT family; COG1292 Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. (524 aa)    
Predicted Functional Partners:
EAQ08241.1
Permease protein of polyamine ABC transporter; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
  
    0.577
EAQ08242.1
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
  
    0.574
EAQ08240.1
Probable ATP-binding component of ABC transporter; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
       0.570
EAQ08244.1
Creatinine amidohydrolase; COG1402 Uncharacterized protein, putative amidase.
 
     0.488
EAQ08243.1
Probable binding protein component of ABC transporter; COG0687 Spermidine/putrescine-binding periplasmic protein.
       0.445
EAQ07165.1
Sensor histidine kinase; COG0591 Na+/proline symporter.
  
  
 0.430
EAQ08212.1
Glutamine-pyruvate aminotransferase; COG0067 Glutamate synthase domain 1.
      
 0.414
EAQ07050.1
ABC glycine betaine/L-proline transporter, ATPase subunit, ProV; COG4175 ABC-type proline/glycine betaine transport system, ATPase component.
  
   
 0.408
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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