Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ08245.1Transcriptional regulatory protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (298 aa)    
Predicted Functional Partners:
EAQ08244.1
Creatinine amidohydrolase; COG1402 Uncharacterized protein, putative amidase.
 
     0.693
EAQ05469.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.666
EAQ08243.1
Probable binding protein component of ABC transporter; COG0687 Spermidine/putrescine-binding periplasmic protein.
 
     0.625
EAQ08212.1
Glutamine-pyruvate aminotransferase; COG0067 Glutamate synthase domain 1.
     
 0.602
EAQ06255.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.515
EAQ08242.1
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
     0.502
EAQ08246.1
Creatinase; COG0006 Xaa-Pro aminopeptidase.
       0.500
EAQ08241.1
Permease protein of polyamine ABC transporter; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
  
  0.451
rpoB
DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 
   0.448
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.448
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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