STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ08252.1Site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family. (322 aa)    
Predicted Functional Partners:
EAQ08251.1
Hypothetical protein.
       0.773
EAQ06935.1
Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
  0.644
EAQ08253.1
Hypothetical protein; COG0582 Integrase.
      0.556
EAQ08254.1
Hypothetical protein.
       0.483
EAQ08255.1
Hypothetical protein.
       0.463
EAQ07502.1
Competence protein F, putative; COG1040 Predicted amidophosphoribosyltransferases.
   
    0.463
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.459
EAQ07977.1
COG0287 Prephenate dehydrogenase.
  
    0.417
EAQ08250.1
COG2963 Transposase and inactivated derivatives.
       0.404
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.