STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ08255.1Hypothetical protein. (227 aa)    
Predicted Functional Partners:
EAQ08253.1
Hypothetical protein; COG0582 Integrase.
 
     0.937
EAQ08254.1
Hypothetical protein.
      0.895
EAQ08260.1
COG0582 Integrase.
 
     0.798
EAQ08218.1
Hypothetical protein; COG0582 Integrase.
  
     0.771
EAQ08226.1
COG0582 Integrase; Belongs to the 'phage' integrase family.
  
     0.763
EAQ07446.1
COG1749 Flagellar hook protein FlgE.
  
     0.695
EAQ07440.1
COG1256 Flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
  
     0.673
EAQ07402.1
Putative flagellar protein FliS; COG1516 Flagellin-specific chaperone FliS.
  
     0.665
EAQ05987.1
Hypothetical protein.
  
     0.598
EAQ05981.1
Site-specific recombinase, phage integrase family; COG0582 Integrase; Belongs to the 'phage' integrase family.
  
     0.592
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.