STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ08263.1COG1609 Transcriptional regulators. (159 aa)    
Predicted Functional Partners:
EAQ07374.1
Putative transcriptional regulator, LacI family protein; COG1609 Transcriptional regulators.
 
     0.972
EAQ08212.1
Glutamine-pyruvate aminotransferase; COG0067 Glutamate synthase domain 1.
    
 
 0.877
EAQ07789.1
Phosphocarrier protein HPr; COG1925 Phosphotransferase system, HPr-related proteins.
   
 
 0.746
EAQ07634.1
Transcriptional regulator, LacI family; COG1609 Transcriptional regulators.
  
     0.573
cysC
Binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Catalyzes the synthesis of activated sulfate.
    
   0.565
EAQ05204.1
COG1609 Transcriptional regulators.
  
     0.535
EAQ07381.1
COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
 
   
 0.515
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
    
 
 0.510
EAQ07380.1
COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
   0.498
ribB
Bifunctional GTP cyclohydrolaseII/3,4-dihydroxy-2butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
   0.489
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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