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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07381.1COG0246 Mannitol-1-phosphate/altronate dehydrogenases. (498 aa)    
Predicted Functional Partners:
EAQ07378.1
Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component.
 
  
 0.935
EAQ07380.1
COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
  0.933
xylA
COG2115 Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.920
EAQ07017.1
Putative Fructokinase; COG0524 Sugar kinases, ribokinase family.
 
  
 0.913
EAQ07715.1
Mannose-6-phosphate isomerase /; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.901
EAQ07377.1
COG1175 ABC-type sugar transport systems, permease components.
 
    0.890
EAQ07379.1
ABC sorbitol/mannitol transporter, ATPase subunit; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
  
 0.832
EAQ05630.1
Mandelate racemase/muconate lactonizing enzyme family protein; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.782
EAQ07375.1
Periplasmic sorbitol-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
    0.753
xylB
Xylulose kinase; COG1070 Sugar (pentulose and hexulose) kinases.
 
  
 0.702
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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