STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07385.1Hypothetical protein; COG0500 SAM-dependent methyltransferases. (254 aa)    
Predicted Functional Partners:
gloB
Hydroxyacylglutathione hydrolase, putative; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
     
 0.729
EAQ07453.1
HemY domain protein; COG3071 Uncharacterized enzyme of heme biosynthesis.
  
     0.685
EAQ07386.1
Hypothetical protein; COG0116 Predicted N6-adenine-specific DNA methylase.
 
     0.683
ftsQ
Cell division septal protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.680
EAQ07387.1
Hypothetical protein; COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
       0.618
EAQ07040.1
DNA-binding protein, putative; COG1396 Predicted transcriptional regulators.
  
     0.614
EAQ07100.1
Transcriptional regulator, MarR family; COG1846 Transcriptional regulators.
  
     0.605
EAQ07358.1
Hypothetical protein; COG1562 Phytoene/squalene synthetase.
  
  
 0.599
EAQ07461.1
Putative S-adenosyl L-homocystein hydrolase; COG1896 Predicted hydrolases of HD superfamily.
  
     0.581
EAQ07383.1
Chaperonin clpA/B; COG0542 ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family.
       0.540
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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