Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ07392.1Hypothetical protein; COG0790 FOG: TPR repeat, SEL1 subfamily. (204 aa)    
Predicted Functional Partners:
EAQ07448.1
COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
   
 
 0.835
EAQ06935.1
Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.788
EAQ08068.1
Hypothetical protein.
    
 0.782
EAQ07449.1
Flagellar proximal rod protein FlgB; COG1815 Flagellar basal body protein.
    
 
 0.741
fliE
COG1677 Flagellar hook-basal body protein.
    
 
 0.734
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
    
 
 0.726
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
    
 
 0.725
EAQ07399.1
Hypothetical protein; COG1370 Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit.
    
 
 0.724
fliP
Flagellar transport protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
    
 
 0.703
EAQ07429.1
Flagellar FliF M-ring protein; COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein.
    
 
 0.702
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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