STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07410.1TRm23b IS ATP-binding protein; COG1484 DNA replication protein. (269 aa)    
Predicted Functional Partners:
EAQ07249.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 
 0.980
EAQ07409.1
Site-specfic recombinase, phage integrase family; COG0582 Integrase.
       0.759
EAQ07408.1
COG1360 Flagellar motor protein.
       0.746
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.675
EAQ07407.1
COG1291 Flagellar motor component.
       0.659
EAQ06413.1
Unknown protein encoded by ISEc8 within prophage; COG3436 Transposase and inactivated derivatives.
  
     0.587
EAQ06414.1
70 kDa peroxisomal membrane protein; COG3436 Transposase and inactivated derivatives.
  
     0.571
EAQ07406.1
Hypothetical protein; COG0068 Hydrogenase maturation factor.
       0.466
EAQ07071.1
Hypothetical protein; COG0593 ATPase involved in DNA replication initiation; Belongs to the DnaA family.
    
 
 0.418
dnaA
Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
    
 
 0.418
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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