STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07417.1Flagellar protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (275 aa)    
Predicted Functional Partners:
EAQ07416.1
Flagellar protein FlhB; COG1377 Flagellar biosynthesis pathway, component FlhB.
 
 0.999
fliQ
Flagellar protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
 
 0.999
fliP
Flagellar transport protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
 
 0.999
EAQ07421.1
Flagellar motor switch FliN protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
 
 
 0.995
fliE
COG1677 Flagellar hook-basal body protein.
 
 
 0.995
EAQ07429.1
Flagellar FliF M-ring protein; COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein.
 
 
 0.990
EAQ07449.1
Flagellar proximal rod protein FlgB; COG1815 Flagellar basal body protein.
 
 
 0.990
flhA
Flagellar biosynthesis protein, FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
  
 0.988
EAQ07422.1
COG1868 Flagellar motor switch protein.
 
  
 0.988
EAQ07423.1
Flagellar biosynthesis protein, FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.984
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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