Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ07441.1Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; COG3951 Rod binding protein. (112 aa)    
Predicted Functional Partners:
EAQ07440.1
COG1256 Flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.992
EAQ07449.1
Flagellar proximal rod protein FlgB; COG1815 Flagellar basal body protein.
 
 
 0.979
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.978
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.975
EAQ07439.1
COG1344 Flagellin and related hook-associated proteins.
 
  
 0.966
EAQ07445.1
COG4787 Flagellar basal body rod protein.
 
 
 0.964
EAQ07446.1
COG1749 Flagellar hook protein FlgE.
 
  
 0.964
EAQ07423.1
Flagellar biosynthesis protein, FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.962
EAQ07447.1
Flagellar scaffolding protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.959
EAQ07429.1
Flagellar FliF M-ring protein; COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein.
 
  
 0.958
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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