STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07448.1COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family. (139 aa)    
Predicted Functional Partners:
EAQ07429.1
Flagellar FliF M-ring protein; COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein.
 
 
 0.999
fliE
COG1677 Flagellar hook-basal body protein.
 
 
 0.999
EAQ07444.1
COG4786 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
 0.999
EAQ07445.1
COG4787 Flagellar basal body rod protein.
 
 0.999
EAQ07446.1
COG1749 Flagellar hook protein FlgE.
 
 0.999
EAQ07449.1
Flagellar proximal rod protein FlgB; COG1815 Flagellar basal body protein.
 
 
 0.999
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.998
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.998
fliQ
Flagellar protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
 
 0.997
EAQ07447.1
Flagellar scaffolding protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
 
 
 0.997
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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