STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07465.1Hypothetical protein. (199 aa)    
Predicted Functional Partners:
EAQ07463.1
Exonuclease, putative; COG0349 Ribonuclease D.
       0.855
EAQ07466.1
COG1934 Uncharacterized protein conserved in bacteria.
 
   
 0.838
EAQ07464.1
Arabinose 5-phosphate isomerase; COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Belongs to the SIS family. GutQ/KpsF subfamily.
       0.820
EAQ07467.1
ABC transporter, ATP-binding protein; COG1137 ABC-type (unclassified) transport system, ATPase component.
       0.727
EAQ07281.1
COG1426 Uncharacterized protein conserved in bacteria.
  
     0.709
EAQ07656.1
Lipoprotein, putative.
  
     0.670
EAQ07648.1
Hypothetical protein.
  
     0.663
EAQ07939.1
Arginine/ornithine transport system ATPase; COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
  
     0.649
EAQ07919.1
Hypothetical protein.
  
     0.645
lptD
Organic solvent tolerance protein, putative; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
   
 0.640
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.