STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07499.1Transcriptional regulator, putative; COG1846 Transcriptional regulators. (147 aa)    
Predicted Functional Partners:
EAQ07501.1
Glutaredoxin; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
     
 0.824
EAQ07500.1
Hydrolase, carbon-nitrogen family; COG0388 Predicted amidohydrolase.
  
    0.818
EAQ07502.1
Competence protein F, putative; COG1040 Predicted amidophosphoribosyltransferases.
  
    0.754
EAQ07503.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
       0.598
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
       0.521
EAQ06151.1
Hypothetical protein.
  
     0.480
EAQ07636.1
Hypothetical protein.
  
     0.451
EAQ07506.1
Lipoprotein, putative; COG2340 Uncharacterized protein with SCP/PR1 domains.
 
     0.445
EAQ07987.1
Twin-arginine translocation pathway signal sequence domain protein; COG2217 Cation transport ATPase.
 
 
  0.435
EAQ08047.1
Hypothetical protein.
  
     0.418
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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