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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07505.1Hypothetical protein. (91 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
       0.742
EAQ07503.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
       0.577
EAQ07506.1
Lipoprotein, putative; COG2340 Uncharacterized protein with SCP/PR1 domains.
       0.553
EAQ06231.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.502
EAQ06284.1
Putative integrase/resolvase recombinase protein; COG4974 Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.438
EAQ07502.1
Competence protein F, putative; COG1040 Predicted amidophosphoribosyltransferases.
       0.436
EAQ08001.1
Hypothetical protein; COG0395 ABC-type sugar transport system, permease component.
  
     0.434
EAQ06532.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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